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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. TBX2, T-box 2
Sequence ID:NM_005994
Entrez Gene ID:6909
Ensembl ID:ENSG00000121068

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:17q23.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:17: 59484614 - 59486437

NM_005994 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
16765947725659477931
6779445947904459479311
94510915948042159480567
109211685948178159481857
116913325948196659482129
133319675948256259483196
196833785948541459486824

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6339405Full LengthBC052566T-box 2
30347457IncompleteBC070054T-box 2

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_005985  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_005994 NP_005985 Q13207 T-box

Related Sequences

 
mRNAGenPeptSwissProt
U28049 AAA73861 Q13207
S81264 AAB36216 Q13207
BC052566 AAH52566 Q13207
AB209378 BAD92615 Q59FT1
AL832900 CAH10619 Q69YM3

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens TBX2 NP_005985 M.musculus Tbx2 21385 Gene Info NP_033350 96
R.norvegicus Tbx2 303398   NP_001100503 91
D.melanogaster bi 31379   NP_001162663 50

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta