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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. PDE1B, phosphodiesterase 1B, calmodulin-dependent
Sequence ID:NM_000924
NM_001165975
RefSeqGene ID:NG_029621
Entrez Gene ID:5153
Ensembl ID:ENSG00000123360

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:12q13Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:12: 54955368 - 54973023

 Exon Info From UCSC:
NM_000924
NM_001165975

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5200139Full LengthBC032226phosphodiesterase 1B, calmodulin-dependent

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_000915  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_000924 NP_000915 Q01064 EC 3.1.4.17 PDEase_I
PDEase_I_N
NM_001165975 NP_001159447      

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
M94539 AAA58405 Q01064 EC 3.1.4.17
U40584 AAB50018 Q16713  
U56976 AAC50769 Q01064 EC 3.1.4.17
U86078 AAC51872 Q01064 EC 3.1.4.17
BC032226 AAH32226 Q01064 EC 3.1.4.17
DQ891673 ABM82599    
DQ894859 ABM85785    
AB209200 BAD92437 Q59GA9  
AK126899 BAG54390 B3KX78  
AK296422 BAG59084 B4DK72  
AK302899 BAG64072 Q7Z364  
AK302931 BAG64092 Q01064 EC 3.1.4.17
AJ401609 CAC82207 Q01064 EC 3.1.4.17
BX538092 CAD98011 Q7Z364  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens PDE1B NP_000915 M.musculus Pde1b 18574 Gene Info NP_032826 96
R.norvegicus Pde1b 29691   NP_073201 96

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)