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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. PRKAG1, protein kinase, AMP-activated, gamma 1 non-catalytic subunit
Sequence ID:NM_001206709
NM_001206710
NM_002733
NM_212461
Entrez Gene ID:5571
Ensembl ID:ENSG00000181929

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:12q12-q14Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:12: 49396060 - 49412562

 Exon Info From UCSC:
NM_002733
NM_212461

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
2964434Full LengthBC000358protein kinase, AMP-activated, gamma 1 non-catalytic subunit

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_002724  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001206709 NP_001193638    
NM_001206710 NP_001193639    
NM_002733 NP_002724 P54619 CBS

Related Sequences

 
mRNAGenPeptSwissProt
BC000358 AAH00358 P54619
BT007345 AAP36009 P54619
AK097606 BAC05117 Q8N7V9
AK293332 BAG56848 B4DDT7
AK303276 BAG64356 B4E094

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens PRKAG1 NP_001193638 M.musculus Prkag1 19082 Gene Info NP_058061 98
R.norvegicus Prkag1 25520   NP_037142 97
C.elegans Y111B2A.8 176677   NP_499637 55

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta