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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. PIM3, pim-3 oncogene
Sequence ID:NM_001001852
Entrez Gene ID:415116
Ensembl ID:ENSG00000198355

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cartilage, cerebrum, colon, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, salivary gland, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, uncharacterized tissue, uterus
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:22q13Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:22: 50354160 - 50357720

NM_001001852 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
15385035414250354679
5396485035477250354881
6496995035496550355015
70010695035508950355458
107012465035633650356512
124723785035658750357718

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
8860375Full LengthBC141855pim-3 oncogene
3849174IncompleteBC017083pim-3 oncogene
5092935IncompleteBC052239pim-3 oncogene
6186546IncompleteBC064477pim-3 oncogene
100000830BC140030pim-3 oncogene

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_001001852  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_001001852 NP_001001852 Q86V86 EC 2.7.11.1 Pkinase

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
BC064477 AAH64477 Q6P2J9  
BC140030 AAI40031    
BC141855 AAI41856 Q86V86 EC 2.7.11.1
AB114795 BAD42438 Q86V86 EC 2.7.11.1
AK292005 BAF84694 Q86V86 EC 2.7.11.1

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens PIM3 NP_001001852 R.norvegicus Pim3 64534   NP_072124 96
M.musculus Pim3 223775 Gene Info NP_663453 96

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)