Skip Navigation
NCI banner National Cancer Institute U.S. National Institutes of Health National Cancer Institute
Genes
  • Gene Tools
Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. SSNA1, Sjogren syndrome nuclear autoantigen 1
Sequence ID:NM_003731
Entrez Gene ID:8636
Ensembl ID:ENSG00000176101

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, brain, cartilage, cerebellum, cerebrum, cervix, colon, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pineal gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, stem cell, stomach, synovium, t-cell, testis, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:9q34.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:9: 140083098 - 140084822

NM_003731 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1177140083053140083229
178377140083517140083716
378941140084258140084821

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3459939Full LengthBC000864Sjogren syndrome nuclear autoantigen 1
3634494IncompleteBC015827Sjogren's syndrome nuclear autoantigen 1
3843148IncompleteBC004118Sjogren's syndrome nuclear autoantigen 1

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_003731 NP_003722 O43805  

Related Sequences

 
mRNAGenPeptSwissProt
BC000864 AAH00864 O43805
BT006766 AAP35412 O43805
Z96932 CAB09660 O43805
CR542238 CAG47034 O43805

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens SSNA1 NP_003722 M.musculus Ssna1 68475 Gene Info NP_075953 97

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)