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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. CSNK1A1, casein kinase 1, alpha 1
Sequence ID:NM_001025105
NM_001271741
NM_001271742
NM_001892
Entrez Gene ID:1452
Ensembl ID:ENSG00000113712

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, retina, skin, soft tissue, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:5q32Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:5: 148872944 - 148880816

 Exon Info From UCSC:
NM_001025105
NM_001892

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
2822250Full LengthBC008717casein kinase 1, alpha 1
2966714IncompleteBC007246casein kinase 1, alpha 1
3936929IncompleteBC021971casein kinase 1, alpha 1
4025440IncompleteBC025371casein kinase 1, alpha 1
4769127IncompleteBC040473casein kinase 1, alpha 1

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_001025105 NP_001020276     Pkinase
Pkinase_Tyr
NM_001271741 NP_001258670      
NM_001271742 NP_001258671      
NM_001892 NP_001883 P48729 EC 2.7.11.1 Pkinase

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
L37042 AAC41760 P48729 EC 2.7.11.1
AF119911 AAF69665 Q9P137  
AF218004 AAG17246 Q71TU5  
BC007246 AAH07246 Q05DL3  
BC008717 AAH08717 P48729 EC 2.7.11.1
BC021971 AAH21971 Q6PJ06  
BC025371 AAH25371 Q6PJ06  
AF447582 AAL60204 Q8WXF2  
BT019829 AAV38632 P48729 EC 2.7.11.1
BT019830 AAV38633 P48729 EC 2.7.11.1
DQ082865 AAY84562 P48729 EC 2.7.11.1
AK293761 BAG57180 B4DER9  
AK294099 BAG57435 B4DFH4  
AK294942 BAG58018 Q71TU5  
AK303794 BAG64751 B4E1D9  
X80693 CAA56710 P48729 EC 2.7.11.1
CR542206 CAG47002 P48729 EC 2.7.11.1

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens CSNK1A1 NP_001020276 M.musculus Csnk1a1 93687 Gene Info NP_666199 100
R.norvegicus Csnk1a1 113927   NP_446067 100
A.gambiae AgaP_AGAP000627 1271683   XP_310451 81
D.melanogaster CkIalpha 32221   NP_001162737 79
A.thaliana ckl8 834350   NP_199146 69
A.thaliana CKL13 839520   NP_171939 67
A.thaliana ckl10 821915   NP_188976 64
A.thaliana CKI1 827076   NP_193170 63

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta