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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. SHARPIN, SHANK-associated RH domain interactor
Sequence ID:NM_030974
NR_038270
Entrez Gene ID:81858
Ensembl ID:ENSG00000179526

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:8q24.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:8: 145153539 - 145159138

NM_030974 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
3156145153537145153690
157285145153768145153896
286410145153983145154107
411564145154179145154332
565673145154412145154520
674815145154605145154746
816956145154831145154971
9571131145157953145158127
11321816145158455145159139

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4737834Full LengthBC034028SHANK-associated RH domain interactor
4907493Full LengthBC025244SHANK-associated RH domain interactor
3609095IncompleteBC002688SHANK-associated RH domain interactor
4121648IncompleteBC017230SHANK-associated RH domain interactor

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_030974 NP_112236 Q9H0F6  

Related Sequences

 
mRNAGenPeptSwissProt
BC002688 AAH02688 Q9H0F6
BC017230 AAH17230 Q6PJD5
BC025244 AAH25244 Q9H0F6
BC034028 AAH34028 Q9H0F6
FJ655995 ACN38058 Q9H0F6
AK075518 BAC11666 Q9H0F6
AB052764 BAC53797 Q9H0F6
AB052765 BAC53798 Q9H0F6
AL136816 CAB66750 Q9H0F6

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens SHARPIN NP_112236 M.musculus Sharpin 106025 Gene Info NP_079616 75
R.norvegicus Sharpin 81859   NP_112415 74

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)