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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. RPL35A, Ribosomal protein L35a
Sequence ID:NM_000996
RefSeqGene ID:NG_011743
Entrez Gene ID:6165
Ensembl ID:ENSG00000182899

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pineal gland, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:3q29Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:3: 197679382 - 197681926

NM_000996 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
141197677051197677091
4284197677806197677848
85237197678029197678181
238382197680873197681017
383481197682620197682718

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3140124Full LengthBC001037ribosomal protein L35a
3856562Full LengthBC017093ribosomal protein L35a
4107948Full LengthBC010949ribosomal protein L35a
5185135Full LengthBC061890ribosomal protein L35a

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_000987  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_000996 NP_000987 P18077 Ribosomal_L35Ae

Related Sequences

 
mRNAGenPeptSwissProt
BC001037 AAH01037 P18077
BC010949 AAH10949 P18077
BC017093 AAH17093 P18077
BC061890 AAH61890 P18077
AY871273 AAX11429 P18077
AB055768 BAB62862  
X52966 CAA37138 P18077

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens RPL35A NP_000987 M.musculus Rpl35a 57808 Gene Info NP_067313 99
M.musculus Gm14279 100046034   XP_003084566 99
R.norvegicus LOC100362237 100362237   XP_002728815 97
A.gambiae AgaP_AGAP002754 1273216   XP_312171 66
D.melanogaster RpL35A 40654   NP_649539 63

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)