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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. RBP1, retinol binding protein 1, cellular
Sequence ID:NM_001130992
NM_001130993
NM_002899
Entrez Gene ID:5947
Ensembl ID:ENSG00000114115

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer Aberrations

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:3q23Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:3: 139236432 - 139258478

 Exon Info From UCSC:
NM_001130992
NM_001130993
NM_002899

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40118103Full LengthBC121052retinol binding protein 1, cellular

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_002890  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001130992 NP_001124464    
NM_001130993 NP_001124465    
NM_002899 NP_002890 P09455 Lipocalin

Related Sequences

 
mRNAGenPeptSwissProt
M36809 AAA35714 P09455
M11433 AAA60257 P09455
BC121052 AAI21053 P09455
EU831495 ACE86414  
EU831403 ACE87090  
AK290315 BAF83004 A8K2Q0
CR541979 CAG46776 P09455
CR542005 CAG46802 P09455

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens RBP1 NP_002890 M.musculus Rbp1 19659 Gene Info NP_035384 97
R.norvegicus Rbp1 25056   NP_036865 97

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)