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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. SLC6A6, Solute carrier family 6 (neurotransmitter transporter, taurine), member 6
Sequence ID:NM_003043
NM_001134367
NM_001134368
Entrez Gene ID:6533
Ensembl ID:ENSG00000131389

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:3p25.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:3: 14487235 - 14509465

 Exon Info From UCSC:
NM_003043
NM_001134367
NM_001134368

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
9021125Full LengthBC137128solute carrier family 6 (neurotransmitter transporter, taurine), member 6
9021126Full LengthBC137129solute carrier family 6 (neurotransmitter transporter, taurine), member 6

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_003034  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001134367 NP_001127839    
NM_001134368 NP_001127840    
NM_003043 NP_003034 P31641 SNF

Related Sequences

 
mRNAGenPeptSwissProt
U16120 AAA50842 P31641
U09220 AAC50443 P31641
BC006252 AAH06252 Q9BRI2
BC111489 AAI11490 Q9BRI2
BC137128 AAI37129 P31641
BC137129 AAI37130 P31641
AF346763 AAK30132 P31641
AB209172 BAD92409 Q59GD7
AK303649 BAG64652 B4E140
Z18956 CAA79481 P31641

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens SLC6A6 NP_001127839 R.norvegicus Slc6a6 29464   NP_058902 94
M.musculus Slc6a6 21366 Gene Info NP_033346 93

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)