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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. IFNAR1, Interferon (alpha, beta and omega) receptor 1
Sequence ID:NM_000629
Entrez Gene ID:3454
Ensembl ID:ENSG00000142166

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, pineal gland, placenta, pooled tissue, prostate, skin, spleen, stem cell, stomach, synovium, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:21q22.11Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:21: 34729385 - 34732123

 Exon Info From UCSC:
NM_000629

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4932084Full LengthBC021825interferon (alpha, beta and omega) receptor 1
3140704IncompleteBC002590interferon (alpha, beta and omega) receptor 1
4049320IncompleteBC065751interferon (alpha, beta and omega) receptor 1
4052451IncompleteBC014338interferon (alpha, beta and omega) receptor 1
4391580IncompleteBC035603interferon (alpha, beta and omega) receptor 1

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_000629 NP_000620 P17181  

Related Sequences

 
mRNAGenPeptSwissProt
J03171 AAA52730 P17181
BC002590 AAH02590 P17181
BC021825 AAH21825 P17181
DQ891323 ABM82249  
DQ894507 ABM85433  
AK222770 BAD96490 P17181
AK222812 BAD96532 P17181
AK312631 BAG35516 P17181
AK298051 BAG60345 B4DNT3

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens IFNAR1 NP_000620 M.musculus Ifnar1 15975 Gene Info NP_034638 51
R.norvegicus Ifnar1 288264   NP_001099363 51

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta