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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. AFAP1, actin filament associated protein 1
Sequence ID:NM_001134647
NM_198595
NM_021638
Entrez Gene ID:60312
Ensembl ID:ENSG00000196526

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:4p16Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:4: 7765150 - 7857252

 Exon Info From UCSC:
NM_001134647
NM_198595

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4914388Full LengthBC032777actin filament associated protein 1
3909917IncompleteBC015900actin filament associated protein

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_940997  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001134647 NP_001128119    
NM_198595 NP_940997 Q8N556 PH

Related Sequences

 
mRNAGenPeptSwissProt
AF188700 AAG17055 Q8N556
BC031673 AAH31673 Q8N5S0
BC032777 AAH32777 Q8N556
AK127962 BAC87209 Q6ZRV0
AB209676 BAD92913 Q8N556
AK290807 BAF83496 Q8N556
AK297631 BAG60004 B4DMU2

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens AFAP1 NP_001128119 M.musculus Afap1 70292 Gene Info NP_081649 86
R.norvegicus Afap1 140935   NP_543176 83

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)