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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. RAB22A, RAB22A, member RAS oncogene family
Sequence ID:NM_020673
Entrez Gene ID:57403
Ensembl ID:ENSG00000124209

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, retina, skin, stem cell, stomach, t-cell, testis, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:20q13.32Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:20: 56884789 - 56935659

NM_020673 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
12985688477056885067
2993785688609856886177
3794605691877356918854
4615325692832856928399
5336395692848756928593
6407495692921156929320
75086485693466156942559

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3907891Full LengthBC015710RAB22A, member RAS oncogene family
5182786Full LengthBC063457RAB22A, member RAS oncogene family
3997739IncompleteBC007036RAB22A, member RAS oncogene family
4831050IncompleteBC042545RAB22A, member RAS oncogene family

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_065724  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_020673 NP_065724 Q9UL26 Ras

Related Sequences

 
mRNAGenPeptSwissProt
AF091034 AAF00047 Q9UL26
BC007036 AAH07036 Q96IY7
BC015710 AAH15710 Q9UL26
BC063457 AAH63457 Q9UL26
BT007046 AAP35695 Q9UL26
AK091180 BAG52298 Q9UL26
AJ276210 CAC10538 Q9UL26

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens RAB22A NP_065724 M.musculus Rab22a 19334 Gene Info NP_077756 97
R.norvegicus Rab22a 366265   NP_001102436 88

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)