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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. RALBP1, ralA binding protein 1
Sequence ID:NM_006788
Entrez Gene ID:10928
Ensembl ID:ENSG00000017797

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebrum, cervix, colon, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, skin, soft tissue, stem cell, stomach, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:18p11.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:18: 9517176 - 9536243

NM_006788 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
116094755299475688
16145995129889513286
46091895168429517300
919126895221579522506
1269143095245919524752
1431156295257179525848
1563167095308319530938
1671179295333329533453
1793191695337009533823
1917435395356689538104

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3049077Full LengthBC013126ralA binding protein 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_006779  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_006788 NP_006779 Q15311 RhoGAP

Related Sequences

 
mRNAGenPeptSwissProt
L42542 AAB00103 Q15311
BC013126 AAH13126 Q15311
AY517554 AAT44527 Q5GJ68
DQ891604 ABM82530  
EU176588 ABW03389  
AB209924 BAD93161 Q59E87
AK300845 BAG62496 B4DUY4

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens RALBP1 NP_006779 M.musculus Ralbp1 19765 Gene Info NP_033093 93
R.norvegicus Ralbp1 84014   NP_114456 93
A.gambiae AgaP_AGAP003146 1273818   XP_312836 40
D.melanogaster Rlip 42484   NP_650933 39
C.elegans rlbp-1 172530   NP_492140 30

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta