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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. NLRC5, NLR family, CARD domain containing 5
Sequence ID:NM_032206
RefSeqGene ID:NG_030337
Entrez Gene ID:84166
Ensembl ID:ENSG00000140853

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:16q13Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:16: 57054624 - 57116440

 Exon Info From UCSC:
NM_032206

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
100069204Full LengthBC172510NLR family, CARD domain containing 5
4152674IncompleteBC063566NLR family, CARD domain containing 5
5112895IncompleteBC040278nucleotide-binding oligomerization domains 27
5589287IncompleteBC050527NLR family, CARD domain containing 5
100063158BC156512NLR family, CARD domain containing 5

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_115582  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_032206 NP_115582 Q86WI3 LRR_1
NACHT

Related Sequences

 
mRNAGenPeptSwissProt
BC050527 AAH50527 Q86WI3
BC063566 AAH63566 Q86WI3
BC156512 AAI56513  
BC172510 AAI72510  
AF389420 AAO59377 Q86WI3
EF452236 ABO40479 Q86WI3
AK025362 BAB15120 Q9H6Y0
AK027414 BAB55096 Q86WI3
AK027416 BAB55098 Q86WI3
AK074133 BAB84959 Q86WI3
AK074182 BAB85008 Q86WI3
AK090439 BAC03420 Q86WI3
BX640842 CAE45914 Q6MZW3

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens NLRC5 NP_115582 M.musculus Nlrc5 434341 Gene Info NP_001028379 61

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)