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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. GSPT1, G1 to S phase transition 1
Sequence ID:NM_001130006
NM_001130007
NM_002094
Entrez Gene ID:2935
Ensembl ID:ENSG00000103342

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pineal gland, placenta, pooled tissue, prostate, salivary gland, skin, spleen, stem cell, stomach, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:16p13.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:16: 11962234 - 11965608

 Exon Info From UCSC:
NM_001130006
NM_001130007
NM_002094

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
2822947Full LengthBC009503G1 to S phase transition 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_002085  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001130006 NP_001123478    
NM_001130007 NP_001123479 P15170  
NM_002094 NP_002085 P15170 GTP_EFTU
GTP_EFTU_D3
GTP_EFTU_D2

Related Sequences

 
mRNAGenPeptSwissProt
BC009503 AAH09503 P15170
BT006722 AAP35368 Q7KZX8
AK290382 BAF83071 A8K2W7
AK315267 BAG37683 B2RCT6
X17644 CAA35635 P15170

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens GSPT1 NP_002085 R.norvegicus Gspt1 24420   NP_001003978 96
M.musculus Gspt1 14852 Gene Info NP_001123480 96
A.gambiae AgaP_AGAP009310 1280274   XP_320105 71
D.melanogaster Elf 34658   NP_477259 64
C.elegans H19N07.1 179537   NP_505824 60
A.thaliana AT1G18070 838387   NP_001031063 54
N.crassa NCU04790 3876591   XP_960416 53
S.cerevisiae SUP35 851752   NP_010457 52
S.pombe sup35 2539479   NP_588225 49
P.falciparum PF11_0245 810792   XP_001347916 48

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)