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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. FOXN4, Forkhead box N4
Sequence ID:NM_213596
Entrez Gene ID:121643
Ensembl ID:ENSG00000139445

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:12q24.11Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:12: 109717565 - 109728057

NM_213596 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
61957109715783109717734
19582350109719211109719603
23512558109723108109723315
25592655109724452109724548
26562783109725201109725328
27842894109725648109725758
28953019109725860109725984
30203165109727945109728090
31663254109746040109746128
32553356109746923109747024

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
8860453Full LengthBC146825forkhead box N4
40025776IncompleteBC113073forkhead box N4

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_998761  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_213596 NP_998761 Q96NZ1 Fork_head

Related Sequences

 
mRNAGenPeptSwissProt
BC113073 AAI13074 A4FUA3
BC146825 AAI46826 A6H901
AF425596 AAL23949 Q96NZ1
AF425597 AAL23950 Q96NZ1
AK131519 BAD18661 Q96NZ1

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens FOXN4 NP_998761 R.norvegicus Foxn4 288736   NP_001099405 82
M.musculus Foxn4 116810 Gene Info NP_683737 81

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)