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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. KDELR3, KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 3
Sequence ID:NM_006855
NM_016657
Entrez Gene ID:11015
Ensembl ID:ENSG00000100196

Database Links

UniGeneEntrez GeneEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pineal gland, pituitary gland, placenta, pooled tissue, prostate, retina, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:22q13.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:22: 38864100 - 38879450

 Exon Info From UCSC:
NM_006855
NM_016657

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3462392Full LengthBC001277KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 3
40003709Full LengthBC098336KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 3
40003710Full LengthBC098131KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 3
40003711Full LengthBC098156KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 3
40003712Full LengthBC096722KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 3

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_006846  NP_057839  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_006855 NP_006846 O43731 ER_lumen_recept
NM_016657 NP_057839   ER_lumen_recept

Related Sequences

 
mRNAGenPeptSwissProt
BC001277 AAH01277 O43731
BC096722 AAH96722 O43731
BC098131 AAH98131 O43731
BC098156 AAH98156 O43731
BC098336 AAH98336 O43731
DQ891740 ABM82666  
DQ894917 ABM85843  
AK222930 BAD96650 O43731
AK223238 BAD96958 O43731
AK292102 BAF84791 O43731
AL035081 CAA22673 O43731
AL035082 CAA22674 O43731
CR456509 CAG30395 O43731
CU013108 CAK54539  
CU013396 CAK54838  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens KDELR3 NP_006846 M.musculus Kdelr3 105785 Gene Info NP_598851 93
R.norvegicus Kdelr3 315131   NP_001121018 93

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)