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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.

Gene Info

Gene Information For:Hs. PITRM1, Pitrilysin metallopeptidase 1
Sequence ID:NM_001242307
Entrez Gene ID:10531
Ensembl ID:ENSG00000107959

Database Links

UniGeneEntrez GeneEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:10p15.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:10: 3179925 - 3200279

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3503609Full LengthBC001150pitrilysin metallopeptidase 1
4040225Full LengthBC005025pitrilysin metallopeptidase 1
4822631Full LengthBC095422pitrilysin metallopeptidase 1
8322421Full LengthBC113369pitrilysin metallopeptidase 1
8327455Full LengthBC111987pitrilysin metallopeptidase 1
4836892IncompleteBC045577pitrilysin metallopeptidase 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_055704  

Protein Infomation

NM_001242307 NP_001229236    
NM_001242309 NP_001229238    
NM_014889 NP_055704   Peptidase_M16_C

Related Sequences

AF061243 AAC67244 Q5JRX3
BC001150 AAH01150 Q5JRX3
BC005025 AAH05025 Q5JRX3
BC095422 AAH95422 Q5JRX3
BC111987 AAI11988 Q5JRX3
BC113369 AAI13370 Q5JRX3
AB029027 BAA83056 Q5JRX3
AK001183 BAG50863 B3KM51
AK002061 BAG51008 Q5JRX3
AK023476 BAG51199 B3KN37
AK293788 BAG57201 B4DEU0
AK294865 BAG57968 B4DH07
AK299464 BAG61430 B4DRW8
AK303406 BAG64460 B4E0J8
CR749279 CAH18134 Q68DT6

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene Info Protein
H.sapiens PITRM1 NP_055704 M.musculus Pitrm1 69617 Gene Info NP_660113 87
R.norvegicus Pitrm1 307081   NP_001100833 85
A.gambiae AgaP_AGAP006616 1277202   XP_316646 43
N.crassa NCU01272 3876900   XP_960750 43
D.melanogaster CG3107 35475   NP_724396 41
S.pombe SPBC119.17 2540111   NP_595299 41

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)