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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. HARS, histidyl-tRNA synthetase
Sequence ID:NM_001258040
NM_001258041
NM_001258042
NM_002109
RefSeqGene ID:NG_032158
Entrez Gene ID:3035
Ensembl ID:ENSG00000170445

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:5q31.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:5: 140053489 - 140070952


Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
2821065Full LengthBC080514histidyl-tRNA synthetase
4331277Full LengthBC011807histidyl-tRNA synthetase

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_002100  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_001258040 NP_001244969      
NM_001258041 NP_001244970      
NM_001258042 NP_001244971      
NM_002109 NP_002100 P12081 EC 6.1.1.21 WHEP-TRS
tRNA-synt_2b
HGTP_anticodon

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
BC011807 AAH11807 P12081 EC 6.1.1.21
BC080514 AAH80514 P12081 EC 6.1.1.21
AY995220 AAX99363 Q52NV4  
JF432166 ADZ15383    
AK124831 BAG54103 B3KWE1  
AK293154 BAG56699 B4DDD8  
AK293531 BAG57013 B4DEA2  
AK295219 BAG58213 B4DHQ1  
AK302295 BAG63635 B4DY73  
AK303778 BAG64737 B4E1C5  
X05345 CAA28956 P12081 EC 6.1.1.21
Z11518 CAA77607 P12081 EC 6.1.1.21

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens HARS NP_002100 M.musculus Hars 15115 Gene Info NP_032240 95
R.norvegicus Hars 307492   NP_001020585 95
D.melanogaster Aats-his 32841   NP_573305 66
A.gambiae AgaP_AGAP000735 1272323   XP_311269 60
A.thaliana AT3G02760 820930   NP_186925 57
C.elegans hrs-1 177978   NP_001023373 56
S.pombe hrs1 2540472   NP_596441 56
N.crassa NCU06914 3875369   XP_959261 55
S.cerevisiae HTS1 856145   NP_015358 53

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)