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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. U2AF2, U2 small nuclear RNA auxiliary factor 2
Sequence ID:NM_001012478
NM_007279
RefSeqGene ID:NG_032904
Entrez Gene ID:11338
Ensembl ID:ENSG00000063244

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:19q13.42Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:19: 56166470 - 56185433

 Exon Info From UCSC:
NM_001012478
NM_007279

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3346087Full LengthBC008740U2 small nuclear RNA auxiliary factor 2
3687471Full LengthBC030574U2 small nuclear RNA auxiliary factor 2

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_001012496  NP_009210  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001012478 NP_001012496   RRM_1
NM_007279 NP_009210 P26368 RRM_1

Related Sequences

 
mRNAGenPeptSwissProt
BC008740 AAH08740 P26368
BC030574 AAH30574 P26368
JF432180 ADZ15397  
AB451261 BAG70075 B5BU25
AB451387 BAG70201 B5BU25
X64044 CAA45409 P26368

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens U2AF2 NP_001012496 M.musculus U2af2 22185 Gene Info NP_598432 100
R.norvegicus LOC690372 690372   XP_218195 100
A.gambiae AgaP_AGAP002908 1273053   XP_311994 74
D.melanogaster U2af50 32602   NP_476891 74
C.elegans uaf-1 175270   NP_001022967 62
A.thaliana AT1G60900 842382   NP_176287 45
A.thaliana ATU2AF65A 829822   NP_195387 42
N.crassa NCU03039 3880193   XP_964044 41
P.falciparum PF14_0656 812238   XP_001348830 35
S.pombe prp2 2539645   NP_595396 34

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)