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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. OS9, osteosarcoma amplified 9, endoplasmic reticulum lectin
Sequence ID:NM_001017956
NM_001017957
NM_001017958
NM_001261420
NM_001261421
NM_001261422
NM_001261423
NM_006812
RefSeqGene ID:NG_029228
Entrez Gene ID:10956
Ensembl ID:ENSG00000135506

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pineal gland, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:12q13Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:12: 58087903 - 58115338

 Exon Info From UCSC:
NM_001017956
NM_001017957
NM_001017958
NM_006812

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
2964645Full LengthBC000532osteosarcoma amplified 9, endoplasmic reticulum associated protein
3027883Full LengthBC007254osteosarcoma amplified 9, endoplasmic reticulum associated protein
4123782Full LengthBC023513osteosarcoma amplified 9, endoplasmic reticulum associated protein
2961147IncompleteBC006506osteosarcoma amplified 9, endoplasmic reticulum associated protein

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_001017956  NP_001017958  NP_001017957  NP_006803  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001017956 NP_001017956   PRKCSH
NM_001017957 NP_001017957   PRKCSH
NM_001017958 NP_001017958   PRKCSH
NM_001261420 NP_001248349    
NM_001261421 NP_001248350    
NM_001261422 NP_001248351    
NM_001261423 NP_001248352    
NM_006812 NP_006803 Q13438 PRKCSH

Related Sequences

 
mRNAGenPeptSwissProt
U41635 AAB06495 Q13438
BC000532 AAH00532 Q13438
BC006506 AAH06506 Q9BR60
BC007254 AAH07254 Q13438
BC023513 AAH23513 Q13438
DQ892759 ABM83685  
DQ896004 ABM86982  
EF036505 ABO65091 A4UCT8
AB002806 BAA24363 Q13438
AK291374 BAF84063 A8K5Q9
AK293435 BAG56939 B4DE28
AK294870 BAG57972 B4DH11
AK296770 BAG59349 Q13438
AK298532 BAG60733 B4DPX1
AK303858 BAG64798 B4E1I6
AK304533 BAG65333 B4E321
AK303291 BAH13933 B7Z8E7
CR456791 CAG33072 Q6IBL2

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens OS9 NP_006803 R.norvegicus Os9 362891   NP_001007266 83
M.musculus Os9 216440 Gene Info NP_001164497 82

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)