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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.

Gene Info

Gene Information For:Hs. RPS23, ribosomal protein S23
Sequence ID:NM_001025
Entrez Gene ID:6228
Ensembl ID:ENSG00000186468

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:5q14.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:5: 81569753 - 81571903

NM_001025 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4770703Full LengthBC070221ribosomal protein S23

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_001016  

Protein Infomation

NM_001025 NP_001016 P62266 Ribosomal_S12

Related Sequences

BC070221 AAH70221 P62266
D14530 BAA03400 P62266
D28396 BAA05762  
AK291132 BAF83821 A8K517
AK311772 BAG34715 A8K517
CR456996 CAG33277 P62266

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene Info Protein
H.sapiens RPS23 NP_001016 M.musculus Gm15450 100038875   NP_001094078 100
M.musculus Rps23 66475 Gene Info NP_077137 100
R.norvegicus Rps23 124323   NP_511172 100
D.melanogaster RpS23 36576   NP_610939 91
C.elegans rps-23 178188   NP_502365 85
N.crassa NCU01552 3872393   XP_956255 80
A.thaliana AT5G02960 831724   NP_195916 79
P.falciparum PFC0290w 814387   XP_001351145 79
S.cerevisiae RPS23A 853015   NP_011633 78
S.cerevisiae RPS23B 856250   NP_015457 78
S.pombe rps2302 2541369   NP_596187 76
S.pombe rps23 2542012   NP_593633 76

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)