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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. PPARGC1A, peroxisome proliferator-activated receptor gamma, coactivator 1 alpha
Sequence ID:NM_013261
RefSeqGene ID:NG_028250
Entrez Gene ID:10891
Ensembl ID:ENSG00000109819

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:4p15.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:4: 23797323 - 23891655

 Exon Info From UCSC:
NM_013261

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
100063322Full LengthBC157068peroxisome proliferator-activated receptor gamma, coactivator 1 alpha
100061732BC156323peroxisome proliferator-activated receptor gamma, coactivator 1 alpha

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_037393  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_013261 NP_037393 Q9UBK2 RRM_1

Related Sequences

 
mRNAGenPeptSwissProt
AF159714 AAD51615 Q9UBK2
AF186379 AAD56250 Q9UBK2
AF106698 AAF18573 Q9UBK2
BC156323 AAI56324  
BC157068 AAI57069  
HQ695733 ADW77180 G8DM16
JQ772116 AFK29753 I3RTT5
JQ772117 AFK29754 I3RTT6
JQ772118 AFK29755 I3RTT7
JQ772119 AFK29756 I3RTT8
JQ772120 AFK29757 I3RTT9
AB061325 BAE46508 Q3LIG1
AK296591 BAH12392 B7Z406
AK301883 BAH13576 B7Z7E0

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens PPARGC1A NP_037393 M.musculus Ppargc1a 19017 Gene Info NP_032930 95
R.norvegicus Ppargc1a 83516   NP_112637 95

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta