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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. MGRN1, mahogunin ring finger 1, E3 ubiquitin protein ligase
Sequence ID:NM_001142289
NM_001142290
NM_001142291
NM_015246
Entrez Gene ID:23295
Ensembl ID:ENSG00000102858

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:16p13.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:16: 4674868 - 4740974

 Exon Info From UCSC:
NM_001142289
NM_001142290
NM_001142291
NM_015246

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5755971Full LengthBC050389mahogunin, ring finger 1
4547599IncompleteBC014199mahogunin, ring finger 1

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001142289 NP_001135761    
NM_001142290 NP_001135762 O60291  
NM_001142291 NP_001135763    
NM_015246 NP_056061    

Related Sequences

 
mRNAGenPeptSwissProt
BC050389 AAH50389 O60291
EF471397 ABO69623 O60291
EF471398 ABO69624 O60291
AB011116 BAA25470 O60291
AK299052 BAG61124 B4DR12

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens MGRN1 NP_056061 M.musculus Mgrn1 17237 Gene Info NP_083933 91
R.norvegicus Mgrn1 302938   NP_001013986 91

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)