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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. CDKN2C, Cyclin-dependent kinase inhibitor 2C (p18, inhibits CDK4)
Sequence ID:NM_001262
NM_078626
Entrez Gene ID:1031
Ensembl ID:ENSG00000123080

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, placenta, pooled tissue, prostate, salivary gland, skin, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:1p32Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:1: 51434366 - 51440306

 Exon Info From UCSC:
NM_001262
NM_078626

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3160354Full LengthBC005041cyclin-dependent kinase inhibitor 2C (p18, inhibits CDK4)
3347370Full LengthBC000598cyclin-dependent kinase inhibitor 2C (p18, inhibits CDK4)
3907917Full LengthBC016173cyclin-dependent kinase inhibitor 2C (p18, inhibits CDK4)
3883815IncompleteBC017036cyclin-dependent kinase inhibitor 2C (p18, inhibits CDK4)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_523240  NP_001253  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001262 NP_001253 P42773
Q6ICV4
Ank
NM_078626 NP_523240 P42773
Q6ICV4
Ank

Related Sequences

 
mRNAGenPeptSwissProt
AF041248 AAC39782 P42773
Q6ICV4
U17074 AAC50074 P42773
Q6ICV4
BC000598 AAH00598 P42773
Q6ICV4
BC005041 AAH05041 P42773
Q6ICV4
BC016173 AAH16173 P42773
DQ891516 ABM82442  
DQ894707 ABM85633  
AK091170 BAG52297 Q6ICV4
CR450289 CAG29285 P42773
Q6ICV4

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens CDKN2C NP_001253 R.norvegicus Cdkn2c 54238   NP_571977 93
M.musculus Cdkn2c 12580 Gene Info NP_031697 92

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta