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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. LRP10, low density lipoprotein receptor-related protein 10
Sequence ID:NM_014045
Entrez Gene ID:26020
Ensembl ID:ENSG00000197324

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:14q11.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:14: 23345229 - 23347291

NM_014045 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
15872334095923341545
5886322334194623341990
6337682334251923342654
7699592334426323344453
96019772334456323345580
197821072334589723346026
210832482334614823347288

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
8322766Full LengthBC113714low density lipoprotein receptor-related protein 10
8322768Full LengthBC113716low density lipoprotein receptor-related protein 10
2964526IncompleteBC000424low density lipoprotein receptor-related protein 10
6009130IncompleteBC064901low density lipoprotein receptor-related protein 10
6183907IncompleteBC088378low density lipoprotein receptor-related protein 10
6728330IncompleteBC080648low density lipoprotein receptor-related protein 10

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_054764  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_014045 NP_054764 Q7Z4F1 Ldl_recept_a

Related Sequences

 
mRNAGenPeptSwissProt
AF131760 AAD20037 Q6IAK3
Q7Z4F1
AF177336 AAG17980 Q7Z4F1
BC064901 AAH64901 Q7Z4F1
BC080648 AAH80648 Q66K21
BC088378 AAH88378 Q5I0F9
BC113714 AAI13715 Q7Z4F1
BC113716 AAI13717 Q7Z4F1
AF172816 AAQ13610 Q7Z4F1
AY358399 AAQ88765 Q7Z4F1
AK291030 BAF83719 Q7Z4F1
AL080164 CAB45753 Q7Z4F1
AL834518 CAD39174 Q7Z4F1
BX161500 CAD61944 Q7Z4F1
CR457151 CAG33432 Q6IAK3

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens LRP10 NP_054764 R.norvegicus Lrp10 305880   NP_001032866 89
M.musculus Lrp10 65107 Gene Info NP_075369 88

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)