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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. HCAR2, Hydroxycarboxylic acid receptor 2
Sequence ID:NM_177551
Entrez Gene ID:338442
Ensembl ID:ENSG00000182782

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:12q24.31Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:12: 123186255 - 123187843

NM_177551 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
182082123185839123187903

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5222688Full LengthBC027965niacin receptor 1
5747743Full LengthBC056419niacin receptor 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_808219  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_177551 NP_808219 Q8TDS4 7tm_1

Related Sequences

 
mRNAGenPeptSwissProt
BC027965 AAH27965 Q8TDS4
BC056419 AAH56419 Q8TDS4
AY148884 AAN71621 Q8TDS4
AK290915 BAF83604 A8K4F0

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens HCAR2 NP_808219 R.norvegicus Niacr1 353250   NP_852141 84
M.musculus Niacr1 80885 Gene Info NP_109626 83

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)