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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. KDM2B, lysine (K)-specific demethylase 2B
Sequence ID:NM_001005366
NM_032590
Entrez Gene ID:84678
Ensembl ID:ENSG00000089094

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:12q24.31Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:12: 121866896 - 121947579

 Exon Info From UCSC:
NM_001005366
NM_032590

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40029132Full LengthBC115380F-box and leucine-rich repeat protein 10
3163445IncompleteBC008735F-box and leucine-rich repeat protein 10

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_115979  NP_001005366  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_001005366 NP_001005366     F-box
zf-CXXC
JmjC
NM_032590 NP_115979 Q8NHM5 EC 1.14.11.27 F-box
zf-CXXC
JmjC

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
BC008735 AAH08735 Q8NHM5 EC 1.14.11.27
BC115379 AAI15380 Q1RLM7  
BC115380 AAI15381 Q1RLM6  
AB031230 BAA97672 Q8NHM5 EC 1.14.11.27
AK027440 BAB55112 Q8NHM5 EC 1.14.11.27
AK027692 BAB55301 Q8NHM5 EC 1.14.11.27
AK074718 BAC11159 Q8NHM5 EC 1.14.11.27
AK127328 BAG54483 Q8NHM5 EC 1.14.11.27
AK299827 BAG61696 B4DSN4  
AK316470 BAH14841 B7ZB05  
AL133572 CAB63721 Q8NHM5 EC 1.14.11.27
AJ459424 CAD30700 Q8NHM5 EC 1.14.11.27

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens KDM2B NP_001005366 M.musculus Kdm2b 30841 Gene Info NP_001003953 95
R.norvegicus Kdm2b 304495   NP_001094149 95

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)