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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. KCTD10, Potassium channel tetramerisation domain containing 10
Sequence ID:NM_031954
Entrez Gene ID:83892
Ensembl ID:ENSG00000110906

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pineal gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:12q24.11Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:12: 109887775 - 109897434

NM_031954 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
883246109886459109889617
32473442109893922109894117
34433495109895434109895486
34963582109895796109895882
35833752109898440109898609
37533966109907319109907532
39674057109915064109915154

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5494016Full LengthBC040062potassium channel tetramerisation domain containing 10

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_114160  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_031954 NP_114160 Q9H3F6 K_tetra

Related Sequences

 
mRNAGenPeptSwissProt
AF113208 AAG39279 Q9H3F6
BC040062 AAH40062 Q9H3F6
AY205299 AAO47716 Q9H3F6
AY597809 AAT09002 Q9H3F6
AK027543 BAB55188 Q9H3F6
AB209358 BAD92595 Q9H3F6
AK222548 BAD96268 Q9H3F6
AK092170 BAG52491 B3KRS9
AK123733 BAG53947 B3KVY5

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens KCTD10 NP_114160 M.musculus Kctd10 330171 Gene Info NP_080421 98
A.gambiae AgaP_AGAP006173 1276841   XP_316233 71
D.melanogaster CG10465 35488   NP_610165 71
C.elegans D2045.8 176468   NP_499312 41

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)