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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. PPYR1, pancreatic polypeptide receptor 1
Sequence ID:NM_005972
Entrez Gene ID:5540
Ensembl ID:ENSG00000204174

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:10q11.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:10: 47083533 - 47088320

NM_005972 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
12044708353347083736
2053604708553347085688
36119554708672447088318

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40005502Full LengthBC096238pancreatic polypeptide receptor 1
40005506Full LengthBC099637pancreatic polypeptide receptor 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_005963  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_005972 NP_005963 P50391 7tm_1

Related Sequences

 
mRNAGenPeptSwissProt
U42387 AAB07759 P50391
BC096238 AAH96238 P50391
BC099637 AAH99637 Q4KKW2
AY649985 AAV68196 P50391
AY649986 AAV68197 P50391
CR541950 CAG46748 P50391

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens PPYR1 NP_005963 M.musculus Ppyr1 19065 Gene Info NP_032945 76
R.norvegicus Ppyr1 29471   NP_113769 75

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)