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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. NAP1L1, Nucleosome assembly protein 1-like 1
Sequence ID:NM_004537
NM_139207
Entrez Gene ID:4673
Ensembl ID:ENSG00000187109

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:12q21.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:12: 76439958 - 76440690

 Exon Info From UCSC:
NM_004537
NM_139207

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
2964631Full LengthBC002387nucleosome assembly protein 1-like 1
4653280IncompleteBC015599nucleosome assembly protein 1-like 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_004528  NP_631946  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_004537 NP_004528 P55209 NAP
NM_139207 NP_631946 P55209 NAP

Related Sequences

 
mRNAGenPeptSwissProt
M86667 AAC37544 P55209
AF300335 AAG24631 Q9H2B0
BC002387 AAH02387 P55209
BT007023 AAP35669 P55209
DQ890701 ABM81627  
DQ893550 ABM84476  
DQ893885 ABM84811  
D28430 BAA05796  
AK122670 BAG53656 B3KV44
AK295147 BAH11990 B7Z2V4
AK297500 BAH12595 B7Z4K9
AK298936 BAH12906 B7Z5H0
AK304787 BAH14258 B7Z9C2
AL162068 CAB82405 P55209

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens NAP1L1 NP_004528 M.musculus Nap1l1 53605 Gene Info NP_001140179 98
R.norvegicus Nap1l1 89825   NP_446013 98
A.gambiae AgaP_AGAP001928 1281196   XP_321135 49
D.melanogaster Nap1 37798   NP_477128 49
C.elegans D2096.8 177636   NP_501422 45
S.pombe nap2 2540409   NP_596230 42

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)