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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. NUP107, nucleoporin 107kDa
Sequence ID:NM_020401
Entrez Gene ID:57122
Ensembl ID:ENSG00000111581

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:12q15Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:12: 69080730 - 69136467

 Exon Info From UCSC:
NM_020401

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3909848Full LengthBC017167nucleoporin 107kDa
5785959Full LengthBC043343nucleoporin 107kDa
3883934IncompleteBC017670nucleoporin 107kDa

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_065134  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_020401 NP_065134 P57740 Nup84_Nup100

Related Sequences

 
mRNAGenPeptSwissProt
BC017167 AAH17167 Q6PJE1
BC043343 AAH43343 P57740
AK002079 BAG51012 B3KMK0
AK302773 BAG63979 B4DZ67
AJ295745 CAC03716 P57740

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens NUP107 NP_065134 R.norvegicus Nup107 116555   NP_446282 92
M.musculus Nup107 103468 Gene Info NP_598771 91
A.gambiae AgaP_AGAP001685 4577275   XP_001238474 38
D.melanogaster Nup107 34481   NP_609446 36

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)