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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. STAT6, signal transducer and activator of transcription 6, interleukin-4 induced
Sequence ID:NM_001178078
NM_001178079
NM_001178080
NM_001178081
NM_003153
NR_033659
RefSeqGene ID:NG_021272
Entrez Gene ID:6778
Ensembl ID:ENSG00000166888

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, placenta, pooled tissue, prostate, retina, salivary gland, skin, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:12q13Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:12: 57501945 - 57502061

 Exon Info From UCSC:
NM_001178078
NM_001178079
NM_001178080
NM_001178081
NM_003153

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5530399Full LengthBC075852signal transducer and activator of transcription 6, interleukin-4 induced

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_003144  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001178078 NP_001171549    
NM_001178079 NP_001171550    
NM_001178080 NP_001171551    
NM_001178081 NP_001171552    
NM_003153 NP_003144 P42226 SH2
STAT_alpha
STAT_bind
STAT_int

Related Sequences

 
mRNAGenPeptSwissProt
U16031 AAA57193 P42226
BC075852 AAH75852 P42226
BT007380 AAP36044 Q9BQD2
AY615283 AAU04439 Q56TK0
AB103088 BAD89431 Q5FBW6
AB103089 BAD89432 P42226
AK290431 BAF83120 P42226
AK291044 BAF83733 A8K4S9
AK312471 BAG35377 B2R680
AK298721 BAG60875 B4DQB3
AK299094 BAG61154 B4DR42
AK316142 BAH14513 B7ZA27
AK316236 BAH14607 B7ZAC1

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens STAT6 NP_001171549 M.musculus Stat6 20852 Gene Info NP_033310 87
R.norvegicus Stat6 362896   NP_001037715 86

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta