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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. NR4A1, nuclear receptor subfamily 4, group A, member 1
Sequence ID:NM_001202233
NM_002135
NM_173157
NM_001202234
NM_173158
Entrez Gene ID:3164
Ensembl ID:ENSG00000123358

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:12q13Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:12: 52448112 - 52452728

 Exon Info From UCSC:
NM_002135
NM_173157

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3921259Full LengthBC016147nuclear receptor subfamily 4, group A, member 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_002126  NP_775180  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001202233 NP_001189162    
NM_002135 NP_002126 P22736
Q53Y00
Hormone_recep
zf-C4
NM_173157 NP_775180 P22736
Q53Y00
Hormone_recep
zf-C4

Related Sequences

 
mRNAGenPeptSwissProt
L13740 AAA36763 P22736
BC016147 AAH16147 P22736
Q53Y00
BT007144 AAP35808 P22736
Q53Y00
DQ891134 ABM82060  
DQ894313 ABM85239  
HQ692855 ADZ17366 Q53Y00
D49728 BAA08565 P22736
Q53Y00
D85245 BAA12746 Q15627
AK131566 BAD18699 Q6ZMM6
AK314437 BAG37048 Q15627
AK297526 BAG59929 P22736
AB307717 BAH02308 Q53Y00
AL831844 CAD38550 Q8N3V2
CR456704 CAG32985 Q6IBU8

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens NR4A1 NP_001189162 M.musculus Nr4a1 15370 Gene Info NP_034574 92
R.norvegicus Nr4a1 79240   NP_077364 92
C.elegans nhr-6 175462   NP_497731 37

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)