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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. TUBA1B, tubulin, alpha 1b
Sequence ID:NM_006082
Entrez Gene ID:10376
Ensembl ID:ENSG00000123416

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pineal gland, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:12q13.12Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:12: 49521740 - 49523506

NM_006082 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
2211754952156749522720
117613244952302449523172
132515474952328249523504
154817714952508049525303

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
2905305Full LengthBC006481tubulin, alpha 1b
2964447Full LengthBC001128tubulin, alpha 1b
3349131Full LengthBC000696tubulin, alpha 1b
3445903Full LengthBC010494tubulin, alpha 1b
3533174Full LengthBC009509tubulin, alpha 1b
3537301Full LengthBC009512tubulin, alpha 1b
3537827Full LengthBC009513tubulin, alpha 1b
3871729Full LengthBC008659tubulin, alpha 1b
3909374Full LengthBC015883tubulin, alpha 1b
4100566Full LengthBC006379tubulin, alpha 1b
4111591Full LengthBC009314tubulin, alpha 1b
4277263Full LengthBC030820tubulin, alpha 1b
4430457Full LengthBC017004tubulin, alpha 1b
4561240Full LengthBC011572tubulin, alpha 1b
4579604Full LengthBC021564tubulin, alpha 1b
6089096Full LengthBC071904tubulin, alpha 1b

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_006073  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_006082 NP_006073 P68363 Tubulin
Tubulin_C

Related Sequences

 
mRNAGenPeptSwissProt
K00558 AAA91576 P68363
AF081484 AAC31959 P68363
BC000696 AAH00696 P68363
BC001128 AAH01128 P68363
BC006379 AAH06379 P68363
BC006481 AAH06481 P68363
BC008659 AAH08659 P68363
BC009314 AAH09314 P68363
BC009509 AAH09509 P68363
BC009512 AAH09512 P68363
BC009513 AAH09513 P68363
BC010494 AAH10494 P68363
BC011572 AAH11572 P68363
BC015883 AAH15883 P68363
BC017004 AAH17004 P68363
BC021564 AAH21564 Q8WU19
BC030820 AAH30820 P68363
BC071904 AAH71904 P68363
DQ400107 ABD60581 P68363
DQ891498 ABM82424  
DQ894689 ABM85615  
AK289354 BAF82043 A8JZY9
AK056693 BAG51785 B3KPS3
AK094717 BAG52918 B3KT06
AK293337 BAG56853 B4DDU2

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens TUBA1B NP_006073 M.musculus Tuba1b 22143 Gene Info NP_035784 100
R.norvegicus Tuba1b 500929   NP_001037735 100
C.elegans tba-2 173167   NP_001021050 89
C.elegans tba-1 172831   NP_492600 88
C.elegans tba-4 174680   NP_496351 87
A.thaliana TUA5 832098   NP_197479 84
A.thaliana TUA3 832097   NP_197478 84

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)