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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. PHC2, Polyhomeotic homolog 2 (Drosophila)
Sequence ID:NM_198040
NM_004427
Entrez Gene ID:1912
Ensembl ID:ENSG00000134686

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pineal gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:1p34.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:1: 33832893 - 33896615

 Exon Info From UCSC:
NM_198040
NM_004427

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
9052641Full LengthBC144121polyhomeotic homolog 2 (Drosophila)
40146661Full LengthBC130630polyhomeotic homolog 2 (Drosophila)
4428178IncompleteBC015450polyhomeotic homolog 2 (Drosophila)
30330978IncompleteBC092492polyhomeotic homolog 2 (Drosophila)
30338747IncompleteBC068573polyhomeotic homolog 2 (Drosophila)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_004418  NP_932157  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_004427 NP_004418   SAM_1
SAM_2
NM_198040 NP_932157 Q8IXK0 SAM_1

Related Sequences

 
mRNAGenPeptSwissProt
U89278 AAC51170 P78365
BC015450 AAH15450 Q8IXK0
BC028396 AAH28396 Q8IXK0
BC029269 AAH29269 Q8IXK0
BC068573 AAH68573 Q8IXK0
BC092492 AAH92492 Q8IXK0
BC110863 AAI10864 Q8IXK0
BC130630 AAI30631 Q8IXK0
BC144121 AAI44122 B7ZLY0
AK128821 BAC87622 Q8IXK0
AK292905 BAF85594 A8KA40
AK056429 BAG51706 B3KPJ4
AK294426 BAG57672 B4DG61
AJ242730 CAB44779 Q8IXK0
AJ419231 CAD11673 Q8IXK0

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens PHC2 NP_932157 R.norvegicus Phc2 313038   NP_001013187 89
M.musculus Phc2 54383 Gene Info NP_061244 88
A.gambiae AgaP_AGAP004188 4577267   XP_001230872 37
D.melanogaster ph-p 31181   NP_476871 32
D.melanogaster ph-d 44889   NP_001096865 30

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)