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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. C1R, complement component 1, r subcomponent
Sequence ID:NM_001733
Entrez Gene ID:715
Ensembl ID:ENSG00000159403

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, bone, bone marrow, brain, cartilage, cerebrum, cervix, colon, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:12p13Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:12: 7187722 - 7240440

NM_001733 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
31111971875167188604
1120119671893357189411
1429155172412047241326
1552169972414347241581
1700189672418887242084
1897204372421827242328
2044223672426517242843
2237246572440477244275
2466252672449827245042

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4777940Full LengthBC035220complement component 1, r subcomponent

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001733 NP_001724    

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
M14058 AAA51851 P00736 EC 3.4.21.41
BC035220 AAH35220 P00736 EC 3.4.21.41
EU832834 ACE87845    
GQ129229 ACT64363    
JF432122 ADZ15339    
AK222481 BAD96201 Q53HU9  
AK222491 BAD96211 Q53HT9  
AK291313 BAF84002 A8K5J8  
AK298445 BAG60662 B4DPQ0  
AK303750 BAG64722 B4E1B0  
X04701 CAA28407 P00736 EC 3.4.21.41

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens C1R NP_001724 R.norvegicus C1r 312705   NP_001128027 83
M.musculus C1ra 50909 Gene Info NP_075632 81
M.musculus C1rb 667277 Gene Info NP_001106827 80

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta