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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. FKBP4, FK506 binding protein 4, 59kDa
Sequence ID:NM_002014
Entrez Gene ID:2288
Ensembl ID:ENSG00000004478

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, retina, skin, soft tissue, stem cell, stomach, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:12p13.33Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:12: 2913202 - 2913979

NM_002014 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
130329041072904409
30444829063032906447
44959129068942907036
59271229078712907991
71386929082532908409
87096029090152909105
961104429092042909287
1045123029095572909742
1231147029102822910521
1471373929123162914584

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3542330Full LengthBC001786FK506 binding protein 4, 59kDa
4304462Full LengthBC007924FK506 binding protein 4, 59kDa
3940730IncompleteBC002887FK506 binding protein 4, 59kDa

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_002005  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_002014 NP_002005 Q02790 EC 5.2.1.8 FKBP_C
TPR_1

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
M88279 AAA36111 Q02790 EC 5.2.1.8
BC001786 AAH01786 Q02790 EC 5.2.1.8
BC007924 AAH07924 Q02790 EC 5.2.1.8
DQ893668 ABM84594    
DQ895800 ABM86726    
AK313918 BAG36639 B2R9U2  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens FKBP4 NP_002005 M.musculus Fkbp4 14228 Gene Info NP_034349 90
R.norvegicus Fkbp4 260321   XP_342764 90
D.melanogaster FKBP59 47762   NP_524895 46
A.gambiae AgaP_AGAP009347 3291954   XP_559833 43
C.elegans fkb-6 180371   NP_508026 43
A.thaliana ROF2 834913   NP_199668 39

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)