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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. GATA3, GATA binding protein 3
Sequence ID:NM_001002295
NM_002051
RefSeqGene ID:NG_015859
Entrez Gene ID:2625
Ensembl ID:ENSG00000107485

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Associated Diseases (from OMIM)

DiseaseOther Genes
HYPOPARATHYROIDISM, SENSORINEURAL DEAFNESS, AND RENAL DYSPLASIA 

Cytogenetic Location (from UniGene)

Cytogenetic Location:10p15Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:10: 8096777 - 8116241

 Exon Info From UCSC:
NM_001002295
NM_002051

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
2985843Full LengthBC006793GATA binding protein 3
3504200Full LengthBC003070GATA binding protein 3
3450299IncompleteBC006839GATA binding protein 3

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_002042  NP_001002295  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001002295 NP_001002295   GATA
NM_002051 NP_002042 P23771 GATA

Related Sequences

 
mRNAGenPeptSwissProt
M69106 AAA35870 P23771
BC003070 AAH03070 P23771
BC006793 AAH06793 P23771
AK298213 BAG60483 B4DP71
X55037 CAA38877 P23771
X55122 CAA38916 P23771
X58072 CAA41102 P23771
AM392571 CAL37449  
AM392688 CAL37566  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens GATA3 NP_002042 M.musculus Gata3 14462 Gene Info NP_032117 97
R.norvegicus Gata3 85471   NP_579827 96
A.gambiae AgaP_AGAP004228 3290975   XP_562743 58
D.melanogaster grn 40962   NP_731211 54

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta