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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. EDEM3, ER degradation enhancer, mannosidase alpha-like 3
Sequence ID:NM_025191
Entrez Gene ID:80267
Ensembl ID:ENSG00000116406

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:1q25Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:1: 184659636 - 184723704

 Exon Info From UCSC:
NM_025191

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
100063956Full LengthBC160020ER degradation enhancer, mannosidase alpha-like 3
4152945IncompleteBC016464ER degradation enhancer, mannosidase alpha-like 3

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_079467  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_025191 NP_079467 Q9BZQ6 Glyco_hydro_47
PA

Related Sequences

 
mRNAGenPeptSwissProt
AF288393 AAG60613 Q9BZQ6
BC016464 AAH16464 Q9NWE4
Q7L2Y5
BC105586 AAI05587 Q9BZQ6
BC144149 AAI44150 B7ZLZ2
BC160020 AAI60020  
AK000945 BAA91438 Q9NWE4
AK023095 BAB14402 Q9H941
AK315118 BAG37573 Q9BZQ6
AL117441 CAB55926 Q9BZQ6

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens EDEM3 NP_079467 M.musculus Edem3 66967 Gene Info NP_001034733 95
R.norvegicus Edem3 289085   XP_222721 94
A.gambiae AgaP_AGAP008749 1275602   XP_314865 54
D.melanogaster Edem2 34714   NP_609611 53
C.elegans man(9)-alpha-mannosidase 181210   NP_509671 51

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)