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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. EHD1, EH-domain containing 1
Sequence ID:NM_006795
Entrez Gene ID:10938
Ensembl ID:ENSG00000110047

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, salivary gland, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:11q13Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:11: 64620207 - 64646191

NM_006795 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
2621476462020764622328
214823126462279364622957
231327256462739564627807
272628236464189264641989
282434826464553264646190

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
8143802Full LengthBC104799EH-domain containing 1
8143828Full LengthBC104825EH-domain containing 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_006786  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_006795 NP_006786 Q9H4M9 Dynamin_N

Related Sequences

 
mRNAGenPeptSwissProt
AF001434 AAB81204 Q9H4M9
AF099011 AAD45866 Q9H4M9
AY007161 AAG02009 Q9H4M9
BC104799 AAI04800 Q9H4M9
BC104825 AAI04826 Q9H4M9
AK312316 BAG35240 B2R5U3
AK097842 BAG53542 B2R5U3
AK297654 BAG60021 B4DMV9
AK299096 BAG61156 B4DR44
AK300326 BAG62076 B4DTR4
AK302930 BAG64091 B4DZH9

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens EHD1 NP_006786 M.musculus Ehd1 13660 Gene Info NP_034249 99
R.norvegicus Ehd1 293692   NP_001011939 99
D.melanogaster Past1 41569   NP_524332 70
A.gambiae AgaP_AGAP004593 1275941   XP_315231 68
C.elegans rme-1 179010   NP_001024194 68
A.thaliana EHD1 821573   NP_001030731 55

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)