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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. SFN, stratifin
Sequence ID:NM_006142
Entrez Gene ID:2810
Ensembl ID:ENSG00000175793

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:1p36.11Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:1: 27189632 - 27190947

NM_006142 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
113152718963227190946

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
2822397Full LengthBC000329stratifin
2822397Full LengthBC002995stratifin
3445915Full LengthBC000995stratifin
3457665Full LengthBC001550stratifin
3534328Full LengthBC023552stratifin

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_006133  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_006142 NP_006133 P31947 14-3-3

Related Sequences

 
mRNAGenPeptSwissProt
M93010 AAA59546 P31947
AF029082 AAC52030 P31947
BC000329 AAH00329 P31947
BC000995 AAH00995 P31947
BC001550 AAH01550 P31947
BC002995 AAH02995 P31947
BC023552 AAH23552 P31947
DQ894162 ABM85088  
CR541905 CAG46703 P31947
CR541926 CAG46724 P31947

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens SFN NP_006133 M.musculus Sfn 55948 Gene Info NP_061224 98
R.norvegicus Sfn 313017   XP_232745 98

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta