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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. VPS37C, vacuolar protein sorting 37 homolog C (S. cerevisiae)
Sequence ID:NM_017966
Entrez Gene ID:55048
Ensembl ID:ENSG00000167987

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:11q12.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:11: 60897730 - 60899007

NM_017966 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
2023036089772760900010
230423866090072660900808
238725586090150760901678
255926576090620860906306
265827116092886260928915

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40148285Full LengthBC141827vacuolar protein sorting 37 homolog C (S. cerevisiae)
40148798Full LengthBC142702vacuolar protein sorting 37 homolog C (S. cerevisiae)
2988344IncompleteBC005805vacuolar protein sorting 37 homolog C (S. cerevisiae)
5493762IncompleteBC062604vacuolar protein sorting 37 homolog C (S. cerevisiae)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_060436  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_017966 NP_060436 A5D8V6 Mod_r

Related Sequences

 
mRNAGenPeptSwissProt
BC141827 AAI41828 A5D8V6
BC142702 AAI42703 A5D8V6
AK000854 BAA91399 Q9NWI1
AK302384 BAG63701 B4DYD9
AL834261 CAD38936 A5D8V6
CR457250 CAG33531 Q6IAA5

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens VPS37C NP_060436 M.musculus Vps37c 107305 Gene Info NP_852068 82
R.norvegicus Vps37c 308178   NP_001100933 81

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)