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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. CLP1, cleavage and polyadenylation factor I subunit 1
Sequence ID:NM_001142597
Entrez Gene ID:10978
Ensembl ID:ENSG00000172409

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

Cytogenetic Location (from UniGene)

Cytogenetic Location:11q12Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:11: 57425234 - 57429336

 Exon Info From UCSC:

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
2821321Full LengthBC000446CLP1, cleavage and polyadenylation factor I subunit, homolog (S. cerevisiae)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_006822  

Protein Infomation

NM_001142597 NP_001136069      
NM_006831 NP_006822 Q92989 EC Clp1

Related Sequences

U73524 AAC50780 Q92989 EC
BC000446 AAH00446 Q92989 EC
AK313007 BAG35843 Q92989 EC
AK300232 BAG62000 Q92989 EC

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene Info Protein
H.sapiens CLP1 NP_006822 M.musculus Clp1 98985 Gene Info NP_598601 99
R.norvegicus Clp1 311166   NP_001009599 99
A.gambiae CLP1_ANOGA 1269532   XP_308174 60
D.melanogaster cbc 36494   NP_610876 57
C.elegans F59A2.4 175442   NP_001040858 49
A.thaliana CLPS3 819626   NP_187119 43
S.pombe SPAC22H10.05c 2541907   NP_593741 35
N.crassa NCU06314 3878710   XP_962576 34
S.cerevisiae CLP1 854424   NP_014893 27

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)