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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. MRPL17, mitochondrial ribosomal protein L17
Sequence ID:NM_022061
Entrez Gene ID:63875
Ensembl ID:ENSG00000158042

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, pineal gland, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, t-cell, testis, uncharacterized tissue, uterus
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:11p15.5-p15.4Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:11: 6703051 - 6704555

NM_022061 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1201867016156703632
2019208767039776704045
2088236667043536704631

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4706168Full LengthBC012306mitochondrial ribosomal protein L17

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_071344  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_022061 NP_071344 Q9NRX2 Ribosomal_L17

Related Sequences

 
mRNAGenPeptSwissProt
AF164797 AAF80761 Q9NRX2
AF141338 AAG49441 Q9NRX2
BC012306 AAH12306 Q9NRX2
DQ891581 ABM82507  
DQ894774 ABM85700  
DQ895036 ABM85962  
AK026857 BAB15575 Q9NRX2
CR457177 CAG33458 Q9NRX2

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens MRPL17 NP_071344 M.musculus Mrpl17 27397 Gene Info NP_079577 86
R.norvegicus Mrpl17 171061   NP_598223 83
A.gambiae AgaP_AGAP001865 1281259   XP_321202 46
D.melanogaster mRpL17 38046   NP_523870 42

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)