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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. PRDX3, Peroxiredoxin 3
Sequence ID:NM_006793
NM_014098
Entrez Gene ID:10935
Ensembl ID:ENSG00000165672

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, salivary gland, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:10q25-q26Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:10: 120927232 - 120938324

 Exon Info From UCSC:
NM_006793
NM_014098

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3607558Full LengthBC002685peroxiredoxin 3
3960644Full LengthBC007062peroxiredoxin 3
3961379Full LengthBC021691peroxiredoxin 3
4081846Full LengthBC008435peroxiredoxin 3
4133576Full LengthBC059169peroxiredoxin 3
4134666Full LengthBC009601peroxiredoxin 3
4246143Full LengthBC111397peroxiredoxin 3
4775243Full LengthBC022373peroxiredoxin 3

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_054817  NP_006784  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_006793 NP_006784 P30048 EC 1.11.1.15 AhpC-TSA
NM_014098 NP_054817     AhpC-TSA
Redoxin

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
AF118073 AAF22017 Q9UHU0  
BC002685 AAH02685 P30048 EC 1.11.1.15
BC007062 AAH07062 P30048 EC 1.11.1.15
BC008435 AAH08435 P30048 EC 1.11.1.15
BC009601 AAH09601 P30048 EC 1.11.1.15
BC021691 AAH21691 P30048 EC 1.11.1.15
BC022373 AAH22373 P30048 EC 1.11.1.15
BC059169 AAH59169 P30048 EC 1.11.1.15
BC111397 AAI11398 P30048 EC 1.11.1.15
BT020007 AAV38810 P30048 EC 1.11.1.15
EF036492 ABO65078 A4UCS5  
D49396 BAA08389 P30048 EC 1.11.1.15
AK222659 BAD96379 Q53HC2  
AK313169 BAG35987 P30048 EC 1.11.1.15
X85129 CAA59443 Q14579  
CR450344 CAG29340 P30048 EC 1.11.1.15

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens PRDX3 NP_006784 M.musculus Prdx3 11757 Gene Info NP_031478 86
R.norvegicus Prdx3 64371   NP_071985 85
C.elegans prdx-3 175573   NP_497892 67
D.melanogaster Prx5037 42109   NP_524387 65
A.gambiae TPX1 1271850   XP_310704 64

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)