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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. NOLC1, Nucleolar and coiled-body phosphoprotein 1
Sequence ID:NM_004741
Entrez Gene ID:9221
Ensembl ID:ENSG00000166197

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pineal gland, pituitary gland, placenta, pooled tissue, prostate, retina, skin, soft tissue, spleen, stem cell, stomach, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:10q24.32Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:10: 103912151 - 103922356

 Exon Info From UCSC:
NM_004741

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
2900024Full LengthBC006769nucleolar and coiled-body phosphoprotein 1
3533568Full LengthBC001883nucleolar and coiled-body phosphoprotein 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_004732  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_004741 NP_004732 Q14978 SRP40_C

Related Sequences

 
mRNAGenPeptSwissProt
BC001883 AAH01883 Q14978
BC006769 AAH06769 Q96J17
AY820769 AAV67777 Q14978
DQ891862 ABM82788  
DQ895051 ABM85977  
D21262 BAA04803 Q14978
AK314363 BAG36995 B2RAU8
AK056755 BAG51805 Q96J17
Z34289 CAA84063 Q14978

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens NOLC1 NP_004732 M.musculus Nolc1 70769 Gene Info NP_001034442 77
R.norvegicus Nolc1 64896   NP_074060 76
A.gambiae AgaP_AGAP005369 4576537   XP_001237649 46
C.elegans dao-5 266845   NP_001021004 40

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)