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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. ZFYVE27, zinc finger, FYVE domain containing 27
Sequence ID:NM_001002261
NM_001002262
NM_001174119
NM_001174120
NM_001174121
NM_001174122
NM_144588
RefSeqGene ID:NG_017075
Entrez Gene ID:118813
Ensembl ID:ENSG00000155256

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, pituitary gland, placenta, pooled tissue, prostate, retina, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:10q24.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:10: 99496881 - 99520651

 Exon Info From UCSC:
NM_001002261
NM_001002262
NM_001174119
NM_001174120
NM_001174121
NM_001174122
NM_144588

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4818199Full LengthBC030621zinc finger, FYVE domain containing 27

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_653189  NP_001002261  NP_001002262  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001002261 NP_001002261   FYVE
NM_001002262 NP_001002262   FYVE
NM_001174119 NP_001167590    
NM_001174120 NP_001167591    
NM_001174121 NP_001167592    
NM_001174122 NP_001167593    
NM_144588 NP_653189 Q5T4F4 FYVE

Related Sequences

 
mRNAGenPeptSwissProt
BC030621 AAH30621 Q5T4F4
AK057481 BAB71506 Q5T4F4
AK097945 BAC05200 Q5T4F4
AK074876 BAC11260 Q5T4F4
AK296295 BAH12306 B7Z3S0
AK296588 BAH12390 B7Z404
AK299735 BAH13112 B7Z626
AK300438 BAH13285 B7Z6J9
AL834235 CAD38913 Q5T4F4

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens ZFYVE27 NP_001002261 R.norvegicus Zfyve27 309376   NP_954535 89
M.musculus Zfyve27 319740 Gene Info NP_796293 88

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)