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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. LIPF, lipase, gastric
Sequence ID:NM_001198828
NM_001198829
NM_001198830
NM_004190
Entrez Gene ID:8513
Ensembl ID:ENSG00000182333

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:10q23.31Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:10: 90424200 - 90438570

Transcript StartTranscript EndChromosomal Start Chromosomal End
11559042409390424247
1562719042704390427158
2723899042732590427442
3905889042831490428512
5896989042959390429702
6998359043158590431721
8369829043334490433490
98310549043534290435413
105511269043596590436036
112714979043820190438571

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
8322763Full LengthBC113711lipase, gastric
8327740Full LengthBC112272lipase, gastric

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_004181  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_001198828 NP_001185757      
NM_001198829 NP_001185758      
NM_001198830 NP_001185759      
NM_004190 NP_004181 P07098 EC 3.1.1.3 Abhydrolase_1
Abhydro_lipase

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
BC112272 AAI12273 P07098 EC 3.1.1.3
BC113711 AAI13712 P07098 EC 3.1.1.3
HQ258395 ADR83149    
AK223468 BAD97188 Q53F21  
AK312940 BAG35782 P07098 EC 3.1.1.3
AK301310 BAH13457 Q5VXI8  
AK301320 BAH13459 B7Z723  
A01046 CAA00125 P07098 EC 3.1.1.3
X05997 CAA29413 P07098 EC 3.1.1.3
X05997 CAA29414 P07098 EC 3.1.1.3
AL833751 CAH56244 Q658L8  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens LIPF NP_001185758 M.musculus Lipf 67717 Gene Info NP_080610 78
R.norvegicus Lipf 50682   NP_059037 76
A.gambiae AgaP_AGAP002872 1273095   XP_312042 40

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)